Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Gm7230-201ENSMUST00000173026 815 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Gm6550-201ENSMUST00000187574 993 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9-1A0A075B601 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9-1A0A075B601 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Gm17971-201ENSMUST00000190239 806 ntBASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms