Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Gm27459-201ENSMUST00000184860 107 ntBASIC13.29□□□□□ -0.28
H2afb3S4R1G7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Rps4l-201ENSMUST00000071745 943 ntBASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb3S4R1G7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gm9103-201ENSMUST00000119371 405 ntBASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb3S4R1G7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb3S4R1G7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Gm11764-201ENSMUST00000120221 623 ntBASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms