Protein–RNA interactions for Protein: Q9Z2D7

Mbd4, Methyl-CpG-binding domain protein 4, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd4Q9Z2D7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd4Q9Z2D7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm25144-201ENSMUST00000179561 110 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm25352-201ENSMUST00000179815 110 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mbd4Q9Z2D7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd4Q9Z2D7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm5479-201ENSMUST00000160578 435 ntBASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm27618-201ENSMUST00000183671 60 ntBASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Mbd4Q9Z2D7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms