Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdc45Q9Z1X9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Carlr-201ENSMUST00000181515 2574 ntBASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc45Q9Z1X9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.14■□□□□ 0.34
Cdc45Q9Z1X9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdc45Q9Z1X9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms