Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hmg20bQ9Z104 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.38■□□□□ 0.37
Hmg20bQ9Z104 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gm15467-201ENSMUST00000120582 445 ntBASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20bQ9Z104 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 AW822252-206ENSMUST00000208904 237 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20bQ9Z104 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Gm9182-201ENSMUST00000217829 639 ntBASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmg20bQ9Z104 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gm14494-201ENSMUST00000118786 435 ntBASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms