Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm16476-201ENSMUST00000221544 139 ntBASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Scn8aQ9WTU3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gm6888-201ENSMUST00000221983 706 ntBASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn8aQ9WTU3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms