Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim3Q9R1R2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Trim3Q9R1R2 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.9□□□□□ -0.19
Trim3Q9R1R2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim3Q9R1R2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm14494-201ENSMUST00000118786 435 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trim3Q9R1R2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms