Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm6257-201ENSMUST00000163864 910 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Mir7085-201ENSMUST00000184353 66 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm2272-201ENSMUST00000194903 582 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm9063-201ENSMUST00000223299 582 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Col13a1Q9R1N9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Gm38225-201ENSMUST00000194001 393 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col13a1Q9R1N9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms