Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nubp2Q9R061 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.12□□□□□ -0.31
Nubp2Q9R061 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Mir8117-201ENSMUST00000184773 107 ntBASIC13.12□□□□□ -0.31
Nubp2Q9R061 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nubp2Q9R061 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.11□□□□□ -0.31
Nubp2Q9R061 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp2Q9R061 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm27300-201ENSMUST00000184085 97 ntBASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm27335-201ENSMUST00000184758 97 ntBASIC13.1□□□□□ -0.31
Nubp2Q9R061 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.1□□□□□ -0.31
Nubp2Q9R061 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.1□□□□□ -0.31
Nubp2Q9R061 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp2Q9R061 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms