Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Gm29705-201ENSMUST00000212598 474 ntBASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col4a4Q9QZR9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm27501-201ENSMUST00000183599 107 ntBASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Cts7-204ENSMUST00000225321 1257 ntBASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a4Q9QZR9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Olfr284-202ENSMUST00000206647 966 ntBASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a4Q9QZR9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Gm12384-201ENSMUST00000119228 919 ntBASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Gm27682-201ENSMUST00000183930 110 ntBASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a4Q9QZR9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm13342-201ENSMUST00000121055 207 ntBASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm27772-201ENSMUST00000184900 187 ntBASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a4Q9QZR9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm16570-201ENSMUST00000161951 436 ntBASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 App-207ENSMUST00000227737 2827 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms