Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.52□□□□□ -0.41
Six6Q9QZ28 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.51□□□□□ -0.41
Six6Q9QZ28 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Gm16061-201ENSMUST00000122167 857 ntBASIC12.51□□□□□ -0.41
Six6Q9QZ28 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.51□□□□□ -0.41
Six6Q9QZ28 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.51□□□□□ -0.41
Six6Q9QZ28 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.51□□□□□ -0.41
Six6Q9QZ28 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.51□□□□□ -0.41
Six6Q9QZ28 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six6Q9QZ28 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.5□□□□□ -0.41
Six6Q9QZ28 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six6Q9QZ28 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Six6Q9QZ28 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.49□□□□□ -0.41
Six6Q9QZ28 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms