Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf13bQ9ET35 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf13bQ9ET35 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm11780-201ENSMUST00000136880 516 ntBASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf13bQ9ET35 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf13bQ9ET35 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms