Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.05■□□□□ 0
Nkx2-4Q9EQM3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm15393-201ENSMUST00000120499 219 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm8062-201ENSMUST00000139696 444 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gm42693-201ENSMUST00000196779 631 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Olfr582-201ENSMUST00000098212 960 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-4Q9EQM3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Mir1247-201ENSMUST00000116706 82 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm33320-201ENSMUST00000192232 530 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm2451-201ENSMUST00000199447 999 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm10290-201ENSMUST00000200451 999 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-4Q9EQM3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Gm6244-201ENSMUST00000178732 841 ntBASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Gm10478-201ENSMUST00000084451 396 ntBASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-4Q9EQM3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms