Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a3Q9D554 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Gm9987-201ENSMUST00000069768 567 ntBASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a3Q9D554 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.97□□□□□ -0.01
Sf3a3Q9D554 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a3Q9D554 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a3Q9D554 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Mir770-201ENSMUST00000103252 94 ntBASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms