Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Gm16198-201ENSMUST00000118766 670 ntBASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Gm28659-201ENSMUST00000188013 759 ntBASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc7Q9D541 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc7Q9D541 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.23■□□□□ 0.35
Ccdc7Q9D541 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc7Q9D541 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc7Q9D541 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms