Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Gm23547-201ENSMUST00000158210 271 ntBASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Gm5186-201ENSMUST00000218781 920 ntBASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Gm7775-201ENSMUST00000218871 853 ntBASIC17.54■□□□□ 0.4
Stag1Q9D3E6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Gm2423-201ENSMUST00000074863 733 ntBASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.53■□□□□ 0.4
Stag1Q9D3E6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag1Q9D3E6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm15487-201ENSMUST00000122373 465 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm2451-201ENSMUST00000199447 999 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Gm10290-201ENSMUST00000200451 999 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Shd-206ENSMUST00000225145 998 ntBASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag1Q9D3E6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Stag1Q9D3E6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms