Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Rprl3-201ENSMUST00000157400 290 ntBASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim42Q9D2H5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim42Q9D2H5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim42Q9D2H5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim42Q9D2H5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim42Q9D2H5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim42Q9D2H5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim42Q9D2H5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms