Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.44□□□□□ -0.1
Nde1Q9CZA6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nde1Q9CZA6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nde1Q9CZA6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.41□□□□□ -0.1
Nde1Q9CZA6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nde1Q9CZA6 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms