Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm12138-201ENSMUST00000122180 951 ntBASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Mir125a-201ENSMUST00000083545 68 ntBASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nip7Q9CXK8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Gm18018-201ENSMUST00000198273 408 ntBASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nip7Q9CXK8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Nip7Q9CXK8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Nip7Q9CXK8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nip7Q9CXK8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nip7Q9CXK8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Gm12091-201ENSMUST00000146791 830 ntBASIC18.26■□□□□ 0.51
Nip7Q9CXK8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Gm9908-201ENSMUST00000211534 448 ntBASIC18.26■□□□□ 0.51
Nip7Q9CXK8 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nip7Q9CXK8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nip7Q9CXK8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nip7Q9CXK8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nip7Q9CXK8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms