Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Gm12008-201ENSMUST00000117791 755 ntBASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Gm13597-201ENSMUST00000121239 375 ntBASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc3Q9CWU5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Gm14140-201ENSMUST00000119999 995 ntBASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms