Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Gm45167-201ENSMUST00000208007 322 ntBASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cnot11Q9CWN7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cnot11Q9CWN7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cnot11Q9CWN7 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms