Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Gm6550-201ENSMUST00000187574 993 ntBASIC17.36■□□□□ 0.37
Smc3Q9CW03 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.36■□□□□ 0.37
Smc3Q9CW03 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Gm18246-201ENSMUST00000221023 728 ntBASIC17.36■□□□□ 0.37
Smc3Q9CW03 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc3Q9CW03 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.36■□□□□ 0.37
Smc3Q9CW03 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc3Q9CW03 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc3Q9CW03 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.34■□□□□ 0.37
Smc3Q9CW03 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc3Q9CW03 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms