Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Gm7230-201ENSMUST00000173026 815 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Gm6550-201ENSMUST00000187574 993 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.09□□□□□ -0.47
Rer1Q9CQU3 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.09□□□□□ -0.47
Rer1Q9CQU3 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rer1Q9CQU3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rer1Q9CQU3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.08□□□□□ -0.47
Rer1Q9CQU3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm11764-201ENSMUST00000120221 623 ntBASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm11452-201ENSMUST00000122376 690 ntBASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm45167-201ENSMUST00000208007 322 ntBASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.08□□□□□ -0.48
Rer1Q9CQU3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms