Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim11Q99PQ2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim11Q99PQ2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm2272-201ENSMUST00000194903 582 ntBASIC16.8■□□□□ 0.28
Trim11Q99PQ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim11Q99PQ2 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim11Q99PQ2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms