Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.65□□□□□ -0.06
Trim33Q99PP7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.65□□□□□ -0.06
Trim33Q99PP7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trim33Q99PP7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim33Q99PP7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim33Q99PP7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.64□□□□□ -0.07
Trim33Q99PP7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.64□□□□□ -0.07
Trim33Q99PP7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim33Q99PP7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim33Q99PP7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.63□□□□□ -0.07
Trim33Q99PP7 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.63□□□□□ -0.07
Trim33Q99PP7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim33Q99PP7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim33Q99PP7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms