Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Smc1bQ920F6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
Smc1bQ920F6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Gm27306-201ENSMUST00000183970 107 ntBASIC17.05■□□□□ 0.32
Smc1bQ920F6 Mir8102-201ENSMUST00000184148 139 ntBASIC17.05■□□□□ 0.32
Smc1bQ920F6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Smc1bQ920F6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Gm13223-201ENSMUST00000118609 747 ntBASIC17.04■□□□□ 0.32
Smc1bQ920F6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.04■□□□□ 0.32
Smc1bQ920F6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc1bQ920F6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.03■□□□□ 0.32
Smc1bQ920F6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm14127-201ENSMUST00000117906 678 ntBASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm15693-201ENSMUST00000120470 637 ntBASIC17.03■□□□□ 0.32
Smc1bQ920F6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm2423-201ENSMUST00000074863 733 ntBASIC17.03■□□□□ 0.32
Smc1bQ920F6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc1bQ920F6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms