Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb5Q91XZ5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb5Q91XZ5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gm24694-201ENSMUST00000180054 110 ntBASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gm27663-201ENSMUST00000184839 110 ntBASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gm29667-201ENSMUST00000190817 490 ntBASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gm37230-201ENSMUST00000194491 818 ntBASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb5Q91XZ5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gm43703-201ENSMUST00000200523 763 ntBASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gm45453-201ENSMUST00000211758 853 ntBASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb5Q91XZ5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Gm4875-201ENSMUST00000118257 786 ntBASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms