Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb6Q91XZ4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Gm15427-201ENSMUST00000117288 531 ntBASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb6Q91XZ4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Gm27525-201ENSMUST00000184465 107 ntBASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms