Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb8Q91XZ2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Gm27741-201ENSMUST00000185060 237 ntBASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Mzt1-203ENSMUST00000227948 952 ntBASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb8Q91XZ2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.41□□□□□ -0.1
Pcdhb8Q91XZ2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms