Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Gm12008-201ENSMUST00000117791 755 ntBASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Gm10499-201ENSMUST00000174094 934 ntBASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Gm2272-201ENSMUST00000194903 582 ntBASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga4Q91XY4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gm5867-201ENSMUST00000063197 592 ntBASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Gm10175-201ENSMUST00000086013 645 ntBASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga4Q91XY4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga4Q91XY4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.54□□□□□ -0.08
Pcdhga4Q91XY4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms