Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh18Q8VHR0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh18Q8VHR0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh18Q8VHR0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms