Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Gm12497-201ENSMUST00000138778 237 ntBASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab40cQ8VHQ4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm15358-201ENSMUST00000119249 520 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm15794-201ENSMUST00000120182 631 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Mir3081-201ENSMUST00000175305 84 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm6345-202ENSMUST00000180900 204 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab40cQ8VHQ4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab40cQ8VHQ4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab40cQ8VHQ4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms