Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.79□□□□□ -0.04
Vps39Q8R5L3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Gm18195-201ENSMUST00000207604 706 ntBASIC14.79□□□□□ -0.04
Vps39Q8R5L3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.79□□□□□ -0.04
Vps39Q8R5L3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm13884-201ENSMUST00000118103 829 ntBASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.78□□□□□ -0.04
Vps39Q8R5L3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps39Q8R5L3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Gm13036-201ENSMUST00000117799 748 ntBASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps39Q8R5L3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms