Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Usp33Q8R5K2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp33Q8R5K2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Asic1-205ENSMUST00000228185 1818 ntBASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp33Q8R5K2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm5479-201ENSMUST00000160578 435 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm43433-201ENSMUST00000196573 481 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm46209-201ENSMUST00000217912 553 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp33Q8R5K2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp33Q8R5K2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms