Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Gm10154-201ENSMUST00000084445 354 ntBASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Thap2-203ENSMUST00000218989 527 ntBASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim29Q8R2Q0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trim29Q8R2Q0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Gm5364-201ENSMUST00000216789 889 ntBASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim29Q8R2Q0 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms