Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vopp1Q8R1C3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm15957-201ENSMUST00000118893 974 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm33320-201ENSMUST00000192232 530 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm45668-201ENSMUST00000211271 493 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gm9797-201ENSMUST00000052902 613 ntBASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Vopp1Q8R1C3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Gm12138-201ENSMUST00000122180 951 ntBASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vopp1Q8R1C3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Gm12585-201ENSMUST00000117307 290 ntBASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vopp1Q8R1C3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vopp1Q8R1C3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vopp1Q8R1C3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vopp1Q8R1C3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
Vopp1Q8R1C3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Vopp1Q8R1C3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vopp1Q8R1C3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vopp1Q8R1C3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Vopp1Q8R1C3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vopp1Q8R1C3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vopp1Q8R1C3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms