Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm14822-201ENSMUST00000122247 291 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm2756-201ENSMUST00000195851 400 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3a1Q8K4Z5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Efs-202ENSMUST00000227037 2540 ntBASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sf3a1Q8K4Z5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Sf3a1Q8K4Z5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms