Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx54Q8K4L0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Gm8652-201ENSMUST00000181363 964 ntBASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Gm9299-201ENSMUST00000206392 1140 ntBASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx54Q8K4L0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx54Q8K4L0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx54Q8K4L0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Gm7561-201ENSMUST00000211203 886 ntBASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Gm17795-201ENSMUST00000214505 757 ntBASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Gm6091-201ENSMUST00000098307 165 ntBASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 BC001981-202ENSMUST00000191393 1545 ntBASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx54Q8K4L0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm5940-201ENSMUST00000117582 1068 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Mir3547-201ENSMUST00000175461 88 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm27847-201ENSMUST00000183711 107 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm27375-201ENSMUST00000183799 107 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm37230-201ENSMUST00000194491 818 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 AC122459.1-201ENSMUST00000228373 885 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm7399-201ENSMUST00000032395 858 ntBASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms