Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap2Q8K389 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Gm2495-201ENSMUST00000191160 466 ntBASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdk5rap2Q8K389 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Gm15240-201ENSMUST00000118156 720 ntBASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap2Q8K389 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm14127-201ENSMUST00000117906 678 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm5912-201ENSMUST00000122282 1438 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Mir6392-201ENSMUST00000184924 108 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm8463-201ENSMUST00000208573 613 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Gm17795-201ENSMUST00000214505 757 ntBASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap2Q8K389 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Mir7654-201ENSMUST00000185082 70 ntBASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Gm21470-201ENSMUST00000187680 696 ntBASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap2Q8K389 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms