Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm18195-201ENSMUST00000207604 706 ntBASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cchcr1Q8K2I2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cchcr1Q8K2I2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.44■□□□□ 0.38
Cchcr1Q8K2I2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gm8749-201ENSMUST00000117737 331 ntBASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gm2272-201ENSMUST00000194903 582 ntBASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gm15590-201ENSMUST00000078419 552 ntBASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cchcr1Q8K2I2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms