Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfwd3Q8CIK8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfwd3Q8CIK8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.9□□□□□ -0.18
Rfwd3Q8CIK8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfwd3Q8CIK8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rfwd3Q8CIK8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rfwd3Q8CIK8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Gm45747-201ENSMUST00000212203 999 ntBASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfwd3Q8CIK8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gm44492-201ENSMUST00000197012 141 ntBASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfwd3Q8CIK8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Gm16198-201ENSMUST00000118766 670 ntBASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfwd3Q8CIK8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms