Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab11fip3Q8CHD8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Gm15653-201ENSMUST00000119247 907 ntBASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Gm38294-201ENSMUST00000192831 381 ntBASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rab11fip3Q8CHD8 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Gm6222-201ENSMUST00000120787 396 ntBASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Gm44344-201ENSMUST00000200287 129 ntBASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab11fip3Q8CHD8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.02■□□□□ 0.64
Rab11fip3Q8CHD8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms