Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Gm8410-201ENSMUST00000117225 605 ntBASIC18.17■□□□□ 0.5
Smc4Q8CG47 Gm13015-201ENSMUST00000118674 204 ntBASIC18.17■□□□□ 0.5
Smc4Q8CG47 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Mir7023-201ENSMUST00000185093 64 ntBASIC18.17■□□□□ 0.5
Smc4Q8CG47 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.17■□□□□ 0.5
Smc4Q8CG47 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.17■□□□□ 0.5
Smc4Q8CG47 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm9726-201ENSMUST00000180321 678 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm2451-201ENSMUST00000199447 999 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm10290-201ENSMUST00000200451 999 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc4Q8CG47 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.16■□□□□ 0.5
Smc4Q8CG47 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc4Q8CG47 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc4Q8CG47 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Smc4Q8CG47 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc4Q8CG47 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Smc4Q8CG47 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc4Q8CG47 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc4Q8CG47 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.14■□□□□ 0.49
Smc4Q8CG47 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Gm25144-201ENSMUST00000179561 110 ntBASIC18.14■□□□□ 0.49
Smc4Q8CG47 Gm25352-201ENSMUST00000179815 110 ntBASIC18.14■□□□□ 0.49
Smc4Q8CG47 Gm29541-201ENSMUST00000191351 678 ntBASIC18.14■□□□□ 0.49
Smc4Q8CG47 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc4Q8CG47 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms