Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc5Q8CG46 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.25■□□□□ 0.51
Smc5Q8CG46 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.24■□□□□ 0.51
Smc5Q8CG46 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gm6376-201ENSMUST00000209407 580 ntBASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.24■□□□□ 0.51
Smc5Q8CG46 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc5Q8CG46 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.23■□□□□ 0.51
Smc5Q8CG46 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Gm15173-201ENSMUST00000122049 433 ntBASIC18.23■□□□□ 0.51
Smc5Q8CG46 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Olfr286-202ENSMUST00000205305 969 ntBASIC18.23■□□□□ 0.51
Smc5Q8CG46 Rps4l-201ENSMUST00000071745 943 ntBASIC18.23■□□□□ 0.51
Smc5Q8CG46 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.23■□□□□ 0.51
Smc5Q8CG46 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smc5Q8CG46 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms