Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vcpip1Q8CDG3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vcpip1Q8CDG3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms