Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.3□□□□□ -0.12
SynpoQ8CC35 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.3□□□□□ -0.12
SynpoQ8CC35 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynpoQ8CC35 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.29□□□□□ -0.12
SynpoQ8CC35 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.29□□□□□ -0.12
SynpoQ8CC35 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gm44492-201ENSMUST00000197012 141 ntBASIC14.29□□□□□ -0.12
SynpoQ8CC35 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SynpoQ8CC35 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynpoQ8CC35 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms