Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Uba3Q8C878 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Uba3Q8C878 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Uba3Q8C878 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Uba3Q8C878 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Uba3Q8C878 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.56■□□□□ 0.08
Uba3Q8C878 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Uba3Q8C878 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Uba3Q8C878 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Uba3Q8C878 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Uba3Q8C878 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.55■□□□□ 0.08
Uba3Q8C878 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.55■□□□□ 0.08
Uba3Q8C878 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.55■□□□□ 0.08
Uba3Q8C878 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.55■□□□□ 0.08
Uba3Q8C878 Gm37935-201ENSMUST00000192012 982 ntBASIC15.55■□□□□ 0.08
Uba3Q8C878 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.55■□□□□ 0.08
Uba3Q8C878 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Carlr-201ENSMUST00000181515 2574 ntBASIC15.55■□□□□ 0.08
Uba3Q8C878 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Uba3Q8C878 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
Uba3Q8C878 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.54■□□□□ 0.08
Uba3Q8C878 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.54■□□□□ 0.08
Uba3Q8C878 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.54■□□□□ 0.08
Uba3Q8C878 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Uba3Q8C878 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Uba3Q8C878 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.54■□□□□ 0.08
Uba3Q8C878 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Uba3Q8C878 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.54■□□□□ 0.08
Uba3Q8C878 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.54■□□□□ 0.08
Uba3Q8C878 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Uba3Q8C878 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Uba3Q8C878 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Gm27702-201ENSMUST00000184512 56 ntBASIC15.53■□□□□ 0.08
Uba3Q8C878 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.53■□□□□ 0.08
Uba3Q8C878 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Uba3Q8C878 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Uba3Q8C878 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms