Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Mir1247-201ENSMUST00000116706 82 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm17150-201ENSMUST00000165577 381 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a6Q8C6K9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a6Q8C6K9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a6Q8C6K9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm11425-201ENSMUST00000119608 498 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 AA619741-201ENSMUST00000195095 646 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gm9396-201ENSMUST00000076703 567 ntBASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms