Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Shd-206ENSMUST00000225145 998 ntBASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptcd1Q8C2E4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Gm12091-201ENSMUST00000146791 830 ntBASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptcd1Q8C2E4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm9719-201ENSMUST00000162765 543 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm8602-201ENSMUST00000184045 607 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm18018-201ENSMUST00000198273 408 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm18062-201ENSMUST00000208020 547 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm18055-201ENSMUST00000208254 547 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm9908-201ENSMUST00000211534 448 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Sybu-209ENSMUST00000228639 4113 ntBASIC18.11■□□□□ 0.49
Ptcd1Q8C2E4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptcd1Q8C2E4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms