Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gm27525-201ENSMUST00000184465 107 ntBASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Gm12260-201ENSMUST00000122447 411 ntBASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Gm9727-201ENSMUST00000161387 555 ntBASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Gm45747-201ENSMUST00000212203 999 ntBASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf3Q8C120 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Gm9385-201ENSMUST00000117563 472 ntBASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3rf3Q8C120 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms